Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chaf1bQ9D0N7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Gm15321-201ENSMUST00000121290 288 ntBASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Mir7684-201ENSMUST00000183858 60 ntBASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Gm6983-201ENSMUST00000214912 628 ntBASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.74□□□□□ -0.53
Chaf1bQ9D0N7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Gm22189-201ENSMUST00000103822 86 ntBASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Gm12291-201ENSMUST00000121627 311 ntBASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Mir6956-201ENSMUST00000183598 62 ntBASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Gm18307-201ENSMUST00000206864 949 ntBASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Gm16372-201ENSMUST00000073088 450 ntBASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Chaf1bQ9D0N7 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 271.9 ms