Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Gm9797-201ENSMUST00000052902 613 ntBASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ddx47Q9CWX9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ddx47Q9CWX9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx47Q9CWX9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx47Q9CWX9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx47Q9CWX9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx47Q9CWX9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms