Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Gm23634-201ENSMUST00000175071 91 ntBASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gtf2a1Q99PM3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Gm27742-201ENSMUST00000184667 60 ntBASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Gm37714-201ENSMUST00000194742 342 ntBASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gtf2a1Q99PM3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gtf2a1Q99PM3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms