Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm9908-201ENSMUST00000211534 448 ntBASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm18473-201ENSMUST00000220543 868 ntBASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Gm8598-201ENSMUST00000221184 836 ntBASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim8Q99PJ2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim8Q99PJ2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.27□□□□□ -0.45
Trim8Q99PJ2 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim8Q99PJ2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm12928-201ENSMUST00000117115 573 ntBASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm12138-201ENSMUST00000122180 951 ntBASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim8Q99PJ2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms