Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vmp1Q99KU0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gm6458-201ENSMUST00000211573 635 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vmp1Q99KU0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm8805-201ENSMUST00000117848 313 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm1335-201ENSMUST00000121653 386 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm11978-201ENSMUST00000122315 466 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm28693-202ENSMUST00000190758 331 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm19931-201ENSMUST00000198920 368 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.11□□□□□ -0.47
Vmp1Q99KU0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.1□□□□□ -0.47
Vmp1Q99KU0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms