Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk9Q99J95 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.61□□□□□ -0.39
Cdk9Q99J95 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Gm9630-201ENSMUST00000178304 885 ntBASIC12.61□□□□□ -0.39
Cdk9Q99J95 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.61□□□□□ -0.39
Cdk9Q99J95 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.61□□□□□ -0.39
Cdk9Q99J95 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk9Q99J95 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm38223-201ENSMUST00000194484 695 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.6□□□□□ -0.39
Cdk9Q99J95 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk9Q99J95 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms