Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Gm11591-201ENSMUST00000120063 702 ntBASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Gm12363-201ENSMUST00000122250 668 ntBASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Gm25261-201ENSMUST00000157416 134 ntBASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Gm23363-201ENSMUST00000175024 79 ntBASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhga4Q91XY4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm6023-201ENSMUST00000118217 606 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm12291-201ENSMUST00000121627 311 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm24548-201ENSMUST00000158650 108 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm38266-201ENSMUST00000194931 421 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhga4Q91XY4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga4Q91XY4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms