Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Olfr284-202ENSMUST00000206647 966 ntBASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Gm6013-201ENSMUST00000212264 699 ntBASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb11Q91UZ8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Gm13875-201ENSMUST00000120162 282 ntBASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Gm13342-201ENSMUST00000121055 207 ntBASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb11Q91UZ8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Gm10434-201ENSMUST00000101158 471 ntBASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb11Q91UZ8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms