Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm4875-201ENSMUST00000118257 786 ntBASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm11524-201ENSMUST00000119349 807 ntBASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm6458-201ENSMUST00000211573 635 ntBASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.38□□□□□ -0.59
Ebf4Q8K4J2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gm14701-201ENSMUST00000117156 348 ntBASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ebf4Q8K4J2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.36□□□□□ -0.59
Ebf4Q8K4J2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms