Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Gm27892-201ENSMUST00000185017 106 ntBASIC15.43■□□□□ 0.06
Smc5Q8CG46 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.43■□□□□ 0.06
Smc5Q8CG46 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Gm37542-201ENSMUST00000192563 2832 ntBASIC15.43■□□□□ 0.06
Smc5Q8CG46 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.43■□□□□ 0.06
Smc5Q8CG46 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc5Q8CG46 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.42■□□□□ 0.06
Smc5Q8CG46 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm12138-201ENSMUST00000122180 951 ntBASIC15.42■□□□□ 0.06
Smc5Q8CG46 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm26927-201ENSMUST00000182385 965 ntBASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.42■□□□□ 0.06
Smc5Q8CG46 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.42■□□□□ 0.06
Smc5Q8CG46 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smc5Q8CG46 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC15.42■□□□□ 0.06
Smc5Q8CG46 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.41■□□□□ 0.06
Smc5Q8CG46 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.41■□□□□ 0.06
Smc5Q8CG46 Gm13492-201ENSMUST00000119772 665 ntBASIC15.41■□□□□ 0.06
Smc5Q8CG46 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Gm24644-201ENSMUST00000157114 139 ntBASIC15.41■□□□□ 0.06
Smc5Q8CG46 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 Gm8018-201ENSMUST00000173536 789 ntBASIC15.41■□□□□ 0.06
Smc5Q8CG46 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.41■□□□□ 0.06
Smc5Q8CG46 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.41■□□□□ 0.06
Smc5Q8CG46 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smc5Q8CG46 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms