Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nup54Q8BTS4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm9083-201ENSMUST00000120423 819 ntBASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm9630-201ENSMUST00000178304 885 ntBASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm3096-201ENSMUST00000185770 364 ntBASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm44958-201ENSMUST00000203734 736 ntBASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup54Q8BTS4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.79□□□□□ -0.36
Nup54Q8BTS4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup54Q8BTS4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup54Q8BTS4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms