Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scfd1Q8BRF7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scfd1Q8BRF7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scfd1Q8BRF7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scfd1Q8BRF7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Gm27627-201ENSMUST00000183644 150 ntBASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Gm18730-201ENSMUST00000218038 343 ntBASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scfd1Q8BRF7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 B9d1os-201ENSMUST00000137010 674 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm5616-201ENSMUST00000165252 384 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm17040-202ENSMUST00000170597 889 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm8741-201ENSMUST00000174736 384 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm27552-201ENSMUST00000183351 62 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Gm27844-201ENSMUST00000183613 62 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Nsd1-205ENSMUST00000224693 852 ntBASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scfd1Q8BRF7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Gm12266-201ENSMUST00000120311 962 ntBASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Mir6979-201ENSMUST00000183927 56 ntBASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scfd1Q8BRF7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scfd1Q8BRF7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scfd1Q8BRF7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.24□□□□□ -0.13
Scfd1Q8BRF7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms