Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Usp54Q8BL06 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp54Q8BL06 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp54Q8BL06 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp54Q8BL06 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm6189-201ENSMUST00000164487 2082 ntBASIC17.45■□□□□ 0.38
Usp54Q8BL06 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm13668-201ENSMUST00000119237 1001 ntBASIC17.45■□□□□ 0.38
Usp54Q8BL06 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm5879-201ENSMUST00000089501 1209 ntBASIC17.45■□□□□ 0.38
Usp54Q8BL06 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm2420-201ENSMUST00000119864 2149 ntBASIC17.45■□□□□ 0.38
Usp54Q8BL06 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm44942-201ENSMUST00000096093 2072 ntBASIC17.45■□□□□ 0.38
Usp54Q8BL06 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp54Q8BL06 AC166341.2-201ENSMUST00000220571 120 ntBASIC17.45■□□□□ 0.38
Usp54Q8BL06 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Rn7s6-201ENSMUST00000175005 291 ntBASIC17.44■□□□□ 0.38
Usp54Q8BL06 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Gm9645-201ENSMUST00000197131 792 ntBASIC17.44■□□□□ 0.38
Usp54Q8BL06 Prrxl1-205ENSMUST00000228878 723 ntBASIC17.44■□□□□ 0.38
Usp54Q8BL06 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp54Q8BL06 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm15744-201ENSMUST00000161734 213 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm9034-201ENSMUST00000182071 1005 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm2875-201ENSMUST00000211333 360 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 AC098716.1-201ENSMUST00000213527 703 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm3619-201ENSMUST00000219947 775 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Gm19009-201ENSMUST00000223072 823 ntBASIC17.43■□□□□ 0.38
Usp54Q8BL06 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Usp54Q8BL06 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms