Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm38158-201ENSMUST00000194617 339 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm6013-201ENSMUST00000212264 699 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm10608-202ENSMUST00000213924 676 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm18515-201ENSMUST00000219755 797 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.39□□□□□ -0.43
Ubp1Q811S7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubp1Q811S7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.38□□□□□ -0.43
Ubp1Q811S7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.38□□□□□ -0.43
Ubp1Q811S7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm43118-201ENSMUST00000199149 775 ntBASIC12.38□□□□□ -0.43
Ubp1Q811S7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm45359-201ENSMUST00000210635 427 ntBASIC12.38□□□□□ -0.43
Ubp1Q811S7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.38□□□□□ -0.43
Ubp1Q811S7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.38□□□□□ -0.43
Ubp1Q811S7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubp1Q811S7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm11793-201ENSMUST00000120433 981 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm24548-201ENSMUST00000158650 108 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubp1Q811S7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.37□□□□□ -0.43
Ubp1Q811S7 Gm42627-201ENSMUST00000197347 224 ntBASIC12.37□□□□□ -0.43
Ubp1Q811S7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms