Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Gm13616-201ENSMUST00000120600 222 ntBASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf220Q6PDX6 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf220Q6PDX6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf220Q6PDX6 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms