Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ctr9Q62018 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctr9Q62018 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctr9Q62018 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctr9Q62018 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Rmrp-201ENSMUST00000157463 271 ntBASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm24845-201ENSMUST00000158034 109 ntBASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm8885-201ENSMUST00000189382 598 ntBASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.78□□□□□ -0.04
Ctr9Q62018 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.78□□□□□ -0.04
Ctr9Q62018 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.78□□□□□ -0.04
Ctr9Q62018 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Gm10076-201ENSMUST00000073238 384 ntBASIC14.78□□□□□ -0.04
Ctr9Q62018 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ctr9Q62018 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ctr9Q62018 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.77□□□□□ -0.04
Ctr9Q62018 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ctr9Q62018 Gm24231-201ENSMUST00000104315 133 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.77□□□□□ -0.05
Ctr9Q62018 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.77□□□□□ -0.05
Ctr9Q62018 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ctr9Q62018 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm18056-201ENSMUST00000207670 568 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm18061-201ENSMUST00000208350 562 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm18063-201ENSMUST00000208529 568 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm18052-201ENSMUST00000208750 559 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ctr9Q62018 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ctr9Q62018 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ctr9Q62018 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ctr9Q62018 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ctr9Q62018 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.77□□□□□ -0.05
Ctr9Q62018 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ctr9Q62018 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm24830-201ENSMUST00000102024 166 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm14832-201ENSMUST00000121289 322 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm25890-201ENSMUST00000177643 165 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm22614-201ENSMUST00000178300 165 ntBASIC14.76□□□□□ -0.05
Ctr9Q62018 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.76□□□□□ -0.05
Ctr9Q62018 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ctr9Q62018 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms