Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm2213-201ENSMUST00000197485 688 ntBASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm44397-201ENSMUST00000195950 113 ntBASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm28760-201ENSMUST00000185995 736 ntBASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms