Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Mir3102-201ENSMUST00000175555 104 ntBASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Prpf38aQ4FK66 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm14277-201ENSMUST00000121195 360 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm23119-201ENSMUST00000158610 140 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm44958-201ENSMUST00000203734 736 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm8913-201ENSMUST00000209491 641 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Prpf38aQ4FK66 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Gm14208-201ENSMUST00000119645 678 ntBASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Rps4l-202ENSMUST00000204242 789 ntBASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Gm19187-201ENSMUST00000206781 892 ntBASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Gm45598-202ENSMUST00000210719 986 ntBASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Gm9996-201ENSMUST00000070359 913 ntBASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Gm26035-201ENSMUST00000083065 308 ntBASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf38aQ4FK66 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms