Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Gm27243-201ENSMUST00000183964 521 ntBASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkl5Q3UTQ8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm12314-201ENSMUST00000118104 538 ntBASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm6023-201ENSMUST00000118217 606 ntBASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm9022-201ENSMUST00000182482 992 ntBASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cdkl5Q3UTQ8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Gm25857-201ENSMUST00000082788 129 ntBASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkl5Q3UTQ8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdkl5Q3UTQ8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms