Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Gm6304-201ENSMUST00000096579 447 ntBASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Spg11Q3UHA3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gm23604-201ENSMUST00000104311 132 ntBASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gm27675-201ENSMUST00000184527 94 ntBASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gm28686-201ENSMUST00000187404 609 ntBASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Spg11Q3UHA3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm12906-201ENSMUST00000154610 441 ntBASIC11.44□□□□□ -0.58
Spg11Q3UHA3 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms