Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.74□□□□□ -0.05
Limch1Q3UH68 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.74□□□□□ -0.05
Limch1Q3UH68 Gm14381-201ENSMUST00000122105 414 ntBASIC14.74□□□□□ -0.05
Limch1Q3UH68 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Gm9630-201ENSMUST00000178304 885 ntBASIC14.74□□□□□ -0.05
Limch1Q3UH68 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Mospd4-201ENSMUST00000180618 576 ntBASIC14.74□□□□□ -0.05
Limch1Q3UH68 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.74□□□□□ -0.05
Limch1Q3UH68 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Limch1Q3UH68 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm4986-201ENSMUST00000119731 549 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm15703-201ENSMUST00000120250 880 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm11434-201ENSMUST00000122379 629 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm3890-201ENSMUST00000182416 207 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Limch1Q3UH68 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.73□□□□□ -0.05
Limch1Q3UH68 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Limch1Q3UH68 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.72□□□□□ -0.05
Limch1Q3UH68 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Gm14760-201ENSMUST00000121831 999 ntBASIC14.72□□□□□ -0.05
Limch1Q3UH68 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.72□□□□□ -0.05
Limch1Q3UH68 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.72□□□□□ -0.05
Limch1Q3UH68 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.72□□□□□ -0.05
Limch1Q3UH68 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Limch1Q3UH68 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms