Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm13996-201ENSMUST00000118456 430 ntBASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.71□□□□□ -0.37
Ebf1Q07802 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.71□□□□□ -0.37
Ebf1Q07802 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm45925-201ENSMUST00000218882 744 ntBASIC12.71□□□□□ -0.37
Ebf1Q07802 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.71□□□□□ -0.37
Ebf1Q07802 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.71□□□□□ -0.37
Ebf1Q07802 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm8385-201ENSMUST00000058999 643 ntBASIC12.71□□□□□ -0.37
Ebf1Q07802 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ebf1Q07802 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ebf1Q07802 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ebf1Q07802 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ebf1Q07802 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ebf1Q07802 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ebf1Q07802 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm22334-201ENSMUST00000158070 133 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm25700-201ENSMUST00000177693 110 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm28450-201ENSMUST00000187349 638 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm8959-201ENSMUST00000213150 571 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ebf1Q07802 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.7□□□□□ -0.38
Ebf1Q07802 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.69□□□□□ -0.38
Ebf1Q07802 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.69□□□□□ -0.38
Ebf1Q07802 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ebf1Q07802 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ebf1Q07802 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm27023-201ENSMUST00000182372 285 ntBASIC12.69□□□□□ -0.38
Ebf1Q07802 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm44262-201ENSMUST00000204969 372 ntBASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm44651-201ENSMUST00000207343 372 ntBASIC12.69□□□□□ -0.38
Ebf1Q07802 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.69□□□□□ -0.38
Ebf1Q07802 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf1Q07802 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ebf1Q07802 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ebf1Q07802 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.69□□□□□ -0.38
Ebf1Q07802 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms