Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm38241-201ENSMUST00000192641 898 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm5904-201ENSMUST00000210286 865 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.86□□□□□ -0.51
Nkx3-2P97503 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx3-2P97503 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.85□□□□□ -0.51
Nkx3-2P97503 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm12058-201ENSMUST00000118614 437 ntBASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.85□□□□□ -0.51
Nkx3-2P97503 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.85□□□□□ -0.51
Nkx3-2P97503 Daam2-202ENSMUST00000224595 1926 ntBASIC11.85□□□□□ -0.51
Nkx3-2P97503 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx3-2P97503 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.84□□□□□ -0.51
Nkx3-2P97503 Mir877-201ENSMUST00000104738 85 ntBASIC11.84□□□□□ -0.51
Nkx3-2P97503 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm26956-201ENSMUST00000182176 986 ntBASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm37444-201ENSMUST00000193605 439 ntBASIC11.84□□□□□ -0.51
Nkx3-2P97503 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx3-2P97503 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms