Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.52□□□□□ -0.73
Npas1P97459 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.52□□□□□ -0.73
Npas1P97459 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.52□□□□□ -0.73
Npas1P97459 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.52□□□□□ -0.73
Npas1P97459 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.52□□□□□ -0.73
Npas1P97459 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Npas1P97459 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.51□□□□□ -0.73
Npas1P97459 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.51□□□□□ -0.73
Npas1P97459 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.51□□□□□ -0.73
Npas1P97459 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Gm6447-201ENSMUST00000118905 835 ntBASIC10.51□□□□□ -0.73
Npas1P97459 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Gm27702-201ENSMUST00000184512 56 ntBASIC10.51□□□□□ -0.73
Npas1P97459 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Npas1P97459 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.51□□□□□ -0.73
Npas1P97459 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.51□□□□□ -0.73
Npas1P97459 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Npas1P97459 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
Npas1P97459 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Npas1P97459 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Npas1P97459 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.5□□□□□ -0.73
Npas1P97459 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.5□□□□□ -0.73
Npas1P97459 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Npas1P97459 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.5□□□□□ -0.73
Npas1P97459 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Npas1P97459 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
Npas1P97459 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.5□□□□□ -0.73
Npas1P97459 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.5□□□□□ -0.73
Npas1P97459 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.5□□□□□ -0.73
Npas1P97459 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.5□□□□□ -0.73
Npas1P97459 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.5□□□□□ -0.73
Npas1P97459 Gm26464-201ENSMUST00000157094 305 ntBASIC10.5□□□□□ -0.73
Npas1P97459 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.5□□□□□ -0.73
Npas1P97459 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.5□□□□□ -0.73
Npas1P97459 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Npas1P97459 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms