Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC8.24□□□□□ -1.09
PrkdcP97313 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PrkdcP97313 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
PrkdcP97313 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
PrkdcP97313 Gm43726-201ENSMUST00000199110 775 ntBASIC8.23□□□□□ -1.09
PrkdcP97313 Gm6108-201ENSMUST00000208365 367 ntBASIC8.23□□□□□ -1.09
PrkdcP97313 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC8.23□□□□□ -1.09
PrkdcP97313 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Gm9089-201ENSMUST00000122027 526 ntBASIC8.23□□□□□ -1.09
PrkdcP97313 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
PrkdcP97313 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
PrkdcP97313 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 AC154354.1-203ENSMUST00000225565 1364 ntBASIC8.23□□□□□ -1.09
PrkdcP97313 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC8.23□□□□□ -1.09
PrkdcP97313 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PrkdcP97313 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm15136-201ENSMUST00000120552 533 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm14113-201ENSMUST00000121399 976 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC8.22□□□□□ -1.09
PrkdcP97313 CT573047.1-201ENSMUST00000223652 851 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 CT025689.1-201ENSMUST00000225214 283 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC8.22□□□□□ -1.09
PrkdcP97313 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC8.22□□□□□ -1.09
PrkdcP97313 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm37851-201ENSMUST00000193871 889 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm38117-201ENSMUST00000194653 939 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm33707-201ENSMUST00000195135 569 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 AC117769.1-201ENSMUST00000224716 1120 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
PrkdcP97313 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
PrkdcP97313 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm10729-202ENSMUST00000193403 1375 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm15519-201ENSMUST00000120088 1566 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm37131-201ENSMUST00000192502 1561 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
PrkdcP97313 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm12194-201ENSMUST00000117756 1012 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PrkdcP97313 Gm43380-201ENSMUST00000200421 220 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 AC134248.1-201ENSMUST00000216113 1176 ntBASIC8.22□□□□□ -1.09
PrkdcP97313 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
PrkdcP97313 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms