Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trim43cP86449 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Mospd4-201ENSMUST00000180618 576 ntBASIC13.6□□□□□ -0.23
Trim43cP86449 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim43cP86449 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim43cP86449 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.6□□□□□ -0.23
Trim43cP86449 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.6□□□□□ -0.23
Trim43cP86449 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim43cP86449 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim43cP86449 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim43cP86449 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.6□□□□□ -0.23
Trim43cP86449 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim43cP86449 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim43cP86449 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.59□□□□□ -0.23
Trim43cP86449 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.59□□□□□ -0.23
Trim43cP86449 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trim43cP86449 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trim43cP86449 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Olfr284-202ENSMUST00000206647 966 ntBASIC13.59□□□□□ -0.23
Trim43cP86449 Gm5904-201ENSMUST00000210286 865 ntBASIC13.59□□□□□ -0.23
Trim43cP86449 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim43cP86449 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim43cP86449 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim43cP86449 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim43cP86449 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trim43cP86449 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43cP86449 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.59□□□□□ -0.23
Trim43cP86449 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim43cP86449 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43cP86449 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43cP86449 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43cP86449 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43cP86449 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trim43cP86449 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim43cP86449 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim43cP86449 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim43cP86449 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim43cP86449 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim43cP86449 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Trim43cP86449 Gm25214-201ENSMUST00000104573 129 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Gm13297-201ENSMUST00000120205 934 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Gm9083-201ENSMUST00000120423 819 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim43cP86449 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43cP86449 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim43cP86449 Gm27501-201ENSMUST00000183599 107 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Mir8109-201ENSMUST00000184375 117 ntBASIC13.58□□□□□ -0.24
Trim43cP86449 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms