Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SgcaP82350 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SgcaP82350 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcaP82350 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
SgcaP82350 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcaP82350 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcaP82350 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SgcaP82350 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.51□□□□□ -0.73
SgcaP82350 Gm37935-201ENSMUST00000192012 982 ntBASIC10.51□□□□□ -0.73
SgcaP82350 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.51□□□□□ -0.73
SgcaP82350 Gm18165-201ENSMUST00000217426 928 ntBASIC10.51□□□□□ -0.73
SgcaP82350 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.51□□□□□ -0.73
SgcaP82350 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SgcaP82350 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.51□□□□□ -0.73
SgcaP82350 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
SgcaP82350 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SgcaP82350 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.51□□□□□ -0.73
SgcaP82350 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SgcaP82350 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SgcaP82350 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
SgcaP82350 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
SgcaP82350 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
SgcaP82350 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.5□□□□□ -0.73
SgcaP82350 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.5□□□□□ -0.73
SgcaP82350 Gm14767-201ENSMUST00000121559 586 ntBASIC10.5□□□□□ -0.73
SgcaP82350 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.5□□□□□ -0.73
SgcaP82350 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.5□□□□□ -0.73
SgcaP82350 Gm43094-201ENSMUST00000196549 921 ntBASIC10.5□□□□□ -0.73
SgcaP82350 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.5□□□□□ -0.73
SgcaP82350 Gm8396-201ENSMUST00000057361 823 ntBASIC10.5□□□□□ -0.73
SgcaP82350 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.5□□□□□ -0.73
SgcaP82350 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.5□□□□□ -0.73
SgcaP82350 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
SgcaP82350 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SgcaP82350 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms