Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.81□□□□□ -0.68
Otx1P80205 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.81□□□□□ -0.68
Otx1P80205 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Otx1P80205 Gm24136-201ENSMUST00000083374 165 ntBASIC10.81□□□□□ -0.68
Otx1P80205 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.81□□□□□ -0.68
Otx1P80205 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.81□□□□□ -0.68
Otx1P80205 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Otx1P80205 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.8□□□□□ -0.68
Otx1P80205 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Otx1P80205 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.8□□□□□ -0.68
Otx1P80205 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Otx1P80205 Gm19184-201ENSMUST00000196798 928 ntBASIC10.8□□□□□ -0.68
Otx1P80205 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Gm5904-201ENSMUST00000210286 865 ntBASIC10.8□□□□□ -0.68
Otx1P80205 Gm45880-201ENSMUST00000213041 853 ntBASIC10.8□□□□□ -0.68
Otx1P80205 Gm45925-201ENSMUST00000218882 744 ntBASIC10.8□□□□□ -0.68
Otx1P80205 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.8□□□□□ -0.68
Otx1P80205 Gm22058-201ENSMUST00000083393 310 ntBASIC10.8□□□□□ -0.68
Otx1P80205 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Otx1P80205 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.8□□□□□ -0.68
Otx1P80205 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Otx1P80205 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Otx1P80205 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.79□□□□□ -0.68
Otx1P80205 Gm13736-201ENSMUST00000119272 253 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.79□□□□□ -0.68
Otx1P80205 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.79□□□□□ -0.68
Otx1P80205 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.79□□□□□ -0.68
Otx1P80205 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Gm6013-201ENSMUST00000212264 699 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Gm9257-201ENSMUST00000221254 232 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Otx1P80205 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Otx1P80205 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.79□□□□□ -0.68
Otx1P80205 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Otx1P80205 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Otx1P80205 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.79□□□□□ -0.68
Otx1P80205 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms