Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sf3b6P59708 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm12341-201ENSMUST00000119724 503 ntBASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm15703-201ENSMUST00000120250 880 ntBASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm23984-201ENSMUST00000157139 203 ntBASIC11.12□□□□□ -0.63
Sf3b6P59708 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm6745-201ENSMUST00000199216 526 ntBASIC11.12□□□□□ -0.63
Sf3b6P59708 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.12□□□□□ -0.63
Sf3b6P59708 Itm2b-204ENSMUST00000228637 783 ntBASIC11.12□□□□□ -0.63
Sf3b6P59708 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.12□□□□□ -0.63
Sf3b6P59708 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sf3b6P59708 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.11□□□□□ -0.63
Sf3b6P59708 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sf3b6P59708 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.11□□□□□ -0.63
Sf3b6P59708 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sf3b6P59708 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.11□□□□□ -0.63
Sf3b6P59708 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.11□□□□□ -0.63
Sf3b6P59708 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sf3b6P59708 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.1□□□□□ -0.63
Sf3b6P59708 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Sf3b6P59708 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms