Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubgcp3P58854 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.77□□□□□ -0.36
Tubgcp3P58854 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubgcp3P58854 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Tubgcp3P58854 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubgcp3P58854 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubgcp3P58854 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubgcp3P58854 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Gm14760-201ENSMUST00000121831 999 ntBASIC12.77□□□□□ -0.37
Tubgcp3P58854 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.77□□□□□ -0.37
Tubgcp3P58854 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Tubgcp3P58854 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubgcp3P58854 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm13492-201ENSMUST00000119772 665 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm12502-201ENSMUST00000120197 444 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm9630-201ENSMUST00000178304 885 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm27731-201ENSMUST00000185192 107 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.76□□□□□ -0.37
Tubgcp3P58854 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubgcp3P58854 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms