Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Shmt1P50431 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shmt1P50431 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Shmt1P50431 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 Gm15547-201ENSMUST00000122152 333 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 Gm8885-201ENSMUST00000189382 598 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Shmt1P50431 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.22□□□□□ -0.29
Shmt1P50431 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.22□□□□□ -0.29
Shmt1P50431 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Shmt1P50431 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shmt1P50431 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.21□□□□□ -0.29
Shmt1P50431 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Shmt1P50431 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Shmt1P50431 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Shmt1P50431 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.21□□□□□ -0.29
Shmt1P50431 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Gm11930-201ENSMUST00000117788 190 ntBASIC13.21□□□□□ -0.29
Shmt1P50431 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Shmt1P50431 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Mir3102-201ENSMUST00000175555 104 ntBASIC13.21□□□□□ -0.29
Shmt1P50431 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.21□□□□□ -0.29
Shmt1P50431 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.21□□□□□ -0.29
Shmt1P50431 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.21□□□□□ -0.29
Shmt1P50431 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shmt1P50431 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Shmt1P50431 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Shmt1P50431 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Shmt1P50431 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shmt1P50431 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.21□□□□□ -0.3
Shmt1P50431 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shmt1P50431 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shmt1P50431 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Shmt1P50431 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Shmt1P50431 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt1P50431 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms