Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gli1P47806 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Gm6152-201ENSMUST00000151704 340 ntBASIC12.23□□□□□ -0.45
Gli1P47806 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Gm3961-201ENSMUST00000204425 994 ntBASIC12.23□□□□□ -0.45
Gli1P47806 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Gli1P47806 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.23□□□□□ -0.45
Gli1P47806 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.23□□□□□ -0.45
Gli1P47806 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.23□□□□□ -0.45
Gli1P47806 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.23□□□□□ -0.45
Gli1P47806 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gli1P47806 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gli1P47806 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gli1P47806 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gli1P47806 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.22□□□□□ -0.45
Gli1P47806 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Gli1P47806 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Gli1P47806 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Gli1P47806 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.22□□□□□ -0.45
Gli1P47806 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gli1P47806 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Mir3102-201ENSMUST00000175555 104 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gli1P47806 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Gm27331-201ENSMUST00000183705 60 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Gm27516-201ENSMUST00000184237 98 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.22□□□□□ -0.45
Gli1P47806 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.22□□□□□ -0.45
Gli1P47806 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.22□□□□□ -0.45
Gli1P47806 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gli1P47806 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gli1P47806 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.22□□□□□ -0.45
Gli1P47806 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.22□□□□□ -0.45
Gli1P47806 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gli1P47806 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gli1P47806 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Gli1P47806 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Gli1P47806 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gli1P47806 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gli1P47806 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gli1P47806 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gli1P47806 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gli1P47806 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Gli1P47806 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gli1P47806 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms