Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.91□□□□□ -0.34
HttP42859 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HttP42859 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
HttP42859 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HttP42859 Gm3150-201ENSMUST00000166418 204 ntBASIC12.91□□□□□ -0.34
HttP42859 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.91□□□□□ -0.34
HttP42859 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.91□□□□□ -0.34
HttP42859 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.91□□□□□ -0.34
HttP42859 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HttP42859 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Gm12684-201ENSMUST00000118675 999 ntBASIC12.91□□□□□ -0.34
HttP42859 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Mir6953-201ENSMUST00000184745 68 ntBASIC12.91□□□□□ -0.34
HttP42859 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.91□□□□□ -0.34
HttP42859 Gm26670-202ENSMUST00000226862 340 ntBASIC12.91□□□□□ -0.34
HttP42859 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HttP42859 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HttP42859 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.9□□□□□ -0.34
HttP42859 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HttP42859 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC12.9□□□□□ -0.34
HttP42859 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.9□□□□□ -0.34
HttP42859 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
HttP42859 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.9□□□□□ -0.34
HttP42859 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.9□□□□□ -0.34
HttP42859 Gm8181-201ENSMUST00000062242 669 ntBASIC12.9□□□□□ -0.34
HttP42859 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.9□□□□□ -0.34
HttP42859 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
HttP42859 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HttP42859 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.9□□□□□ -0.34
HttP42859 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Gm8574-201ENSMUST00000203207 924 ntBASIC12.9□□□□□ -0.34
HttP42859 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.9□□□□□ -0.34
HttP42859 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.9□□□□□ -0.34
HttP42859 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.9□□□□□ -0.34
HttP42859 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HttP42859 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HttP42859 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HttP42859 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HttP42859 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.9□□□□□ -0.35
HttP42859 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.89□□□□□ -0.35
HttP42859 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Gm12337-201ENSMUST00000119634 400 ntBASIC12.89□□□□□ -0.35
HttP42859 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.89□□□□□ -0.35
HttP42859 Gm4462-201ENSMUST00000166453 492 ntBASIC12.89□□□□□ -0.35
HttP42859 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.89□□□□□ -0.35
HttP42859 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.89□□□□□ -0.35
HttP42859 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Grk6-205ENSMUST00000224653 2976 ntBASIC12.89□□□□□ -0.35
HttP42859 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.89□□□□□ -0.35
HttP42859 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
HttP42859 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HttP42859 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HttP42859 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HttP42859 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms