Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Fen1P39749 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fen1P39749 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Fen1P39749 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.61□□□□□ -0.39
Fen1P39749 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Fen1P39749 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Fen1P39749 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Fen1P39749 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.6□□□□□ -0.39
Fen1P39749 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 Gm14350-201ENSMUST00000116642 640 ntBASIC12.6□□□□□ -0.39
Fen1P39749 Gm15371-201ENSMUST00000117057 784 ntBASIC12.6□□□□□ -0.39
Fen1P39749 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Gm8515-201ENSMUST00000194852 576 ntBASIC12.6□□□□□ -0.39
Fen1P39749 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.6□□□□□ -0.39
Fen1P39749 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Fen1P39749 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Fen1P39749 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Fen1P39749 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.59□□□□□ -0.39
Fen1P39749 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Fen1P39749 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.59□□□□□ -0.39
Fen1P39749 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Gm12091-201ENSMUST00000146791 830 ntBASIC12.59□□□□□ -0.39
Fen1P39749 Gm23984-201ENSMUST00000157139 203 ntBASIC12.59□□□□□ -0.39
Fen1P39749 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.59□□□□□ -0.39
Fen1P39749 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.59□□□□□ -0.39
Fen1P39749 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.59□□□□□ -0.39
Fen1P39749 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.59□□□□□ -0.39
Fen1P39749 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.59□□□□□ -0.39
Fen1P39749 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.59□□□□□ -0.39
Fen1P39749 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Fen1P39749 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Fen1P39749 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.59□□□□□ -0.39
Fen1P39749 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Fen1P39749 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.59□□□□□ -0.39
Fen1P39749 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Fen1P39749 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Fen1P39749 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.58□□□□□ -0.39
Fen1P39749 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Fen1P39749 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Fen1P39749 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Fen1P39749 Gm13813-201ENSMUST00000120998 787 ntBASIC12.58□□□□□ -0.4
Fen1P39749 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Gm42612-201ENSMUST00000197986 623 ntBASIC12.58□□□□□ -0.4
Fen1P39749 Gm43170-201ENSMUST00000199827 612 ntBASIC12.58□□□□□ -0.4
Fen1P39749 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.58□□□□□ -0.4
Fen1P39749 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.58□□□□□ -0.4
Fen1P39749 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Fen1P39749 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.58□□□□□ -0.4
Fen1P39749 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Fen1P39749 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms