Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfc1P35601 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rfc1P35601 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.19□□□□□ -0.3
Rfc1P35601 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rfc1P35601 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Rfc1P35601 Gm28760-201ENSMUST00000185995 736 ntBASIC13.19□□□□□ -0.3
Rfc1P35601 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.19□□□□□ -0.3
Rfc1P35601 Gm43094-201ENSMUST00000196549 921 ntBASIC13.19□□□□□ -0.3
Rfc1P35601 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rfc1P35601 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.19□□□□□ -0.3
Rfc1P35601 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
Rfc1P35601 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.19□□□□□ -0.3
Rfc1P35601 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rfc1P35601 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Rfc1P35601 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rfc1P35601 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rfc1P35601 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfc1P35601 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rfc1P35601 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.18□□□□□ -0.3
Rfc1P35601 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.18□□□□□ -0.3
Rfc1P35601 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rfc1P35601 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rfc1P35601 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.18□□□□□ -0.3
Rfc1P35601 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.18□□□□□ -0.3
Rfc1P35601 Gm29608-201ENSMUST00000190444 463 ntBASIC13.18□□□□□ -0.3
Rfc1P35601 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.18□□□□□ -0.3
Rfc1P35601 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.18□□□□□ -0.3
Rfc1P35601 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.18□□□□□ -0.3
Rfc1P35601 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rfc1P35601 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Rfc1P35601 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rfc1P35601 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rfc1P35601 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.17□□□□□ -0.3
Rfc1P35601 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rfc1P35601 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rfc1P35601 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.17□□□□□ -0.3
Rfc1P35601 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfc1P35601 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms