Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Slc6a1P31648 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Slc6a1P31648 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Slc6a1P31648 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Slc6a1P31648 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Slc6a1P31648 BC043934-202ENSMUST00000185694 2356 ntBASIC10.79□□□□□ -0.68
Slc6a1P31648 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.78□□□□□ -0.68
Slc6a1P31648 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.78□□□□□ -0.68
Slc6a1P31648 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.78□□□□□ -0.68
Slc6a1P31648 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.78□□□□□ -0.68
Slc6a1P31648 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Slc6a1P31648 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Slc6a1P31648 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Slc6a1P31648 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Slc6a1P31648 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Slc6a1P31648 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Slc6a1P31648 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Slc6a1P31648 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Slc6a1P31648 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Slc6a1P31648 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.77□□□□□ -0.69
Slc6a1P31648 Gm12490-201ENSMUST00000120255 560 ntBASIC10.77□□□□□ -0.69
Slc6a1P31648 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.77□□□□□ -0.69
Slc6a1P31648 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.77□□□□□ -0.69
Slc6a1P31648 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.77□□□□□ -0.69
Slc6a1P31648 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.77□□□□□ -0.69
Slc6a1P31648 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Slc6a1P31648 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms