Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.75□□□□□ -0.85
Ccl6P27784 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Ccl6P27784 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Ccl6P27784 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.75□□□□□ -0.85
Ccl6P27784 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Ccl6P27784 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Ccl6P27784 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.75□□□□□ -0.85
Ccl6P27784 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.75□□□□□ -0.85
Ccl6P27784 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.75□□□□□ -0.85
Ccl6P27784 Gm18187-201ENSMUST00000196476 984 ntBASIC9.75□□□□□ -0.85
Ccl6P27784 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.75□□□□□ -0.85
Ccl6P27784 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
Ccl6P27784 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.75□□□□□ -0.85
Ccl6P27784 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.75□□□□□ -0.85
Ccl6P27784 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ccl6P27784 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccl6P27784 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ccl6P27784 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.74□□□□□ -0.85
Ccl6P27784 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
Ccl6P27784 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Ccl6P27784 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.74□□□□□ -0.85
Ccl6P27784 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.74□□□□□ -0.85
Ccl6P27784 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.74□□□□□ -0.85
Ccl6P27784 Gm8099-201ENSMUST00000200510 742 ntBASIC9.74□□□□□ -0.85
Ccl6P27784 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.74□□□□□ -0.85
Ccl6P27784 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.74□□□□□ -0.85
Ccl6P27784 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.74□□□□□ -0.85
Ccl6P27784 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.74□□□□□ -0.85
Ccl6P27784 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccl6P27784 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccl6P27784 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms