Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm13612-201ENSMUST00000119276 390 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.03□□□□□ -0.48
BdnfP21237 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Gm28693-202ENSMUST00000190758 331 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.03□□□□□ -0.48
BdnfP21237 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Gm6745-201ENSMUST00000199216 526 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
BdnfP21237 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Gm8598-201ENSMUST00000221184 836 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.03□□□□□ -0.48
BdnfP21237 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BdnfP21237 Mir339-201ENSMUST00000083659 96 ntBASIC12.03□□□□□ -0.48
BdnfP21237 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
BdnfP21237 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
BdnfP21237 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.03□□□□□ -0.48
BdnfP21237 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.03□□□□□ -0.48
BdnfP21237 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BdnfP21237 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BdnfP21237 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BdnfP21237 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BdnfP21237 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BdnfP21237 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BdnfP21237 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
BdnfP21237 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
BdnfP21237 Gm11618-201ENSMUST00000117946 267 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Gm11918-201ENSMUST00000121660 179 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Gm9630-201ENSMUST00000178304 885 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Proscos-202ENSMUST00000178990 666 ntBASIC12.02□□□□□ -0.49
BdnfP21237 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.02□□□□□ -0.49
BdnfP21237 Gm8515-201ENSMUST00000194852 576 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Gm7287-201ENSMUST00000205267 602 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.02□□□□□ -0.49
BdnfP21237 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BdnfP21237 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.02□□□□□ -0.49
BdnfP21237 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.02□□□□□ -0.49
BdnfP21237 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
BdnfP21237 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BdnfP21237 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
BdnfP21237 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.01□□□□□ -0.49
BdnfP21237 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms