Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.01□□□□□ -0.49
Cntn1P12960 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Gm14999-201ENSMUST00000121039 624 ntBASIC12.01□□□□□ -0.49
Cntn1P12960 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.01□□□□□ -0.49
Cntn1P12960 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.01□□□□□ -0.49
Cntn1P12960 Gm15547-201ENSMUST00000122152 333 ntBASIC12.01□□□□□ -0.49
Cntn1P12960 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.01□□□□□ -0.49
Cntn1P12960 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.01□□□□□ -0.49
Cntn1P12960 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.01□□□□□ -0.49
Cntn1P12960 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.01□□□□□ -0.49
Cntn1P12960 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cntn1P12960 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cntn1P12960 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cntn1P12960 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cntn1P12960 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12□□□□□ -0.49
Cntn1P12960 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12□□□□□ -0.49
Cntn1P12960 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Gm39404-201ENSMUST00000216350 313 ntBASIC12□□□□□ -0.49
Cntn1P12960 AC125209.1-201ENSMUST00000225812 766 ntBASIC12□□□□□ -0.49
Cntn1P12960 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cntn1P12960 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Gm4864-201ENSMUST00000219894 1461 ntBASIC12□□□□□ -0.49
Cntn1P12960 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cntn1P12960 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cntn1P12960 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Gm11930-201ENSMUST00000117788 190 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 Gm15703-201ENSMUST00000120250 880 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Rmrp-201ENSMUST00000157463 271 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Gm8712-201ENSMUST00000221090 701 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.99□□□□□ -0.49
Cntn1P12960 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cntn1P12960 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cntn1P12960 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms