Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ApoeP08226 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.84□□□□□ -0.51
ApoeP08226 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.84□□□□□ -0.51
ApoeP08226 Gm18307-201ENSMUST00000206864 949 ntBASIC11.84□□□□□ -0.51
ApoeP08226 Gm18473-201ENSMUST00000220543 868 ntBASIC11.84□□□□□ -0.51
ApoeP08226 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
ApoeP08226 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ApoeP08226 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
ApoeP08226 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.83□□□□□ -0.52
ApoeP08226 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ApoeP08226 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Gm23363-201ENSMUST00000175024 79 ntBASIC11.83□□□□□ -0.52
ApoeP08226 Mir8102-201ENSMUST00000184148 139 ntBASIC11.83□□□□□ -0.52
ApoeP08226 Gm43575-201ENSMUST00000196420 516 ntBASIC11.83□□□□□ -0.52
ApoeP08226 Gm8099-201ENSMUST00000200510 742 ntBASIC11.83□□□□□ -0.52
ApoeP08226 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
ApoeP08226 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
ApoeP08226 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.83□□□□□ -0.52
ApoeP08226 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ApoeP08226 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ApoeP08226 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.82□□□□□ -0.52
ApoeP08226 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
ApoeP08226 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.82□□□□□ -0.52
ApoeP08226 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ApoeP08226 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ApoeP08226 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.82□□□□□ -0.52
ApoeP08226 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Gm12341-201ENSMUST00000119724 503 ntBASIC11.82□□□□□ -0.52
ApoeP08226 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.82□□□□□ -0.52
ApoeP08226 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.82□□□□□ -0.52
ApoeP08226 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ApoeP08226 Gm42612-201ENSMUST00000197986 623 ntBASIC11.82□□□□□ -0.52
ApoeP08226 Gm43170-201ENSMUST00000199827 612 ntBASIC11.82□□□□□ -0.52
ApoeP08226 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.82□□□□□ -0.52
ApoeP08226 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.82□□□□□ -0.52
ApoeP08226 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.82□□□□□ -0.52
ApoeP08226 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ApoeP08226 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms