Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.19□□□□□ -0.62
CcnkO88874 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.19□□□□□ -0.62
CcnkO88874 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.19□□□□□ -0.62
CcnkO88874 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.19□□□□□ -0.62
CcnkO88874 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.19□□□□□ -0.62
CcnkO88874 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CcnkO88874 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CcnkO88874 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CcnkO88874 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CcnkO88874 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.18□□□□□ -0.62
CcnkO88874 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CcnkO88874 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CcnkO88874 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.18□□□□□ -0.62
CcnkO88874 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.18□□□□□ -0.62
CcnkO88874 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.18□□□□□ -0.62
CcnkO88874 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CcnkO88874 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.18□□□□□ -0.62
CcnkO88874 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.18□□□□□ -0.62
CcnkO88874 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.18□□□□□ -0.62
CcnkO88874 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
CcnkO88874 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.18□□□□□ -0.62
CcnkO88874 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
CcnkO88874 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
CcnkO88874 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.18□□□□□ -0.62
CcnkO88874 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.18□□□□□ -0.62
CcnkO88874 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
CcnkO88874 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CcnkO88874 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CcnkO88874 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.17□□□□□ -0.62
CcnkO88874 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.17□□□□□ -0.62
CcnkO88874 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CcnkO88874 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.17□□□□□ -0.62
CcnkO88874 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.17□□□□□ -0.62
CcnkO88874 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.17□□□□□ -0.62
CcnkO88874 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.17□□□□□ -0.62
CcnkO88874 Gm5687-201ENSMUST00000118252 640 ntBASIC11.17□□□□□ -0.62
CcnkO88874 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.17□□□□□ -0.62
CcnkO88874 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Gm15429-201ENSMUST00000151268 798 ntBASIC11.17□□□□□ -0.62
CcnkO88874 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CcnkO88874 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.17□□□□□ -0.62
CcnkO88874 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CcnkO88874 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms