Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.31□□□□□ -0.44
ClppO88696 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClppO88696 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ClppO88696 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ClppO88696 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.3□□□□□ -0.44
ClppO88696 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ClppO88696 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Gm15236-201ENSMUST00000117309 379 ntBASIC12.3□□□□□ -0.44
ClppO88696 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.3□□□□□ -0.44
ClppO88696 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Gm27243-201ENSMUST00000183964 521 ntBASIC12.3□□□□□ -0.44
ClppO88696 Mir7221-201ENSMUST00000184009 72 ntBASIC12.3□□□□□ -0.44
ClppO88696 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.3□□□□□ -0.44
ClppO88696 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.3□□□□□ -0.44
ClppO88696 Gm4857-201ENSMUST00000192718 785 ntBASIC12.3□□□□□ -0.44
ClppO88696 Gm8099-201ENSMUST00000200510 742 ntBASIC12.3□□□□□ -0.44
ClppO88696 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.3□□□□□ -0.44
ClppO88696 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
ClppO88696 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.3□□□□□ -0.44
ClppO88696 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.3□□□□□ -0.44
ClppO88696 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClppO88696 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ClppO88696 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ClppO88696 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.29□□□□□ -0.44
ClppO88696 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
ClppO88696 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Gm22323-201ENSMUST00000103832 109 ntBASIC12.29□□□□□ -0.44
ClppO88696 Gm24255-201ENSMUST00000104481 128 ntBASIC12.29□□□□□ -0.44
ClppO88696 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.29□□□□□ -0.44
ClppO88696 Gm15370-201ENSMUST00000117158 253 ntBASIC12.29□□□□□ -0.44
ClppO88696 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.29□□□□□ -0.44
ClppO88696 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Gm25668-201ENSMUST00000157700 129 ntBASIC12.29□□□□□ -0.44
ClppO88696 Gm26083-201ENSMUST00000157904 193 ntBASIC12.29□□□□□ -0.44
ClppO88696 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.29□□□□□ -0.44
ClppO88696 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.29□□□□□ -0.44
ClppO88696 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.29□□□□□ -0.44
ClppO88696 Gm37259-201ENSMUST00000193903 849 ntBASIC12.29□□□□□ -0.44
ClppO88696 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ClppO88696 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
ClppO88696 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
ClppO88696 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClppO88696 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.29□□□□□ -0.44
ClppO88696 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ClppO88696 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
ClppO88696 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClppO88696 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms