Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Gm11803-201ENSMUST00000119966 444 ntBASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Gm27486-201ENSMUST00000184923 80 ntBASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm28043E0CXC2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Gm8652-201ENSMUST00000181363 964 ntBASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.57□□□□□ -0.4
Gm28043E0CXC2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm28043E0CXC2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Gm11618-201ENSMUST00000117946 267 ntBASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28043E0CXC2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms