Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hfm1D3Z4R1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Gm11980-201ENSMUST00000121445 986 ntBASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Gm45594-201ENSMUST00000211717 241 ntBASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hfm1D3Z4R1 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC17.27■□□□□ 0.36
Hfm1D3Z4R1 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Gm12419-201ENSMUST00000116649 636 ntBASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hfm1D3Z4R1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Gm25545-201ENSMUST00000122673 323 ntBASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Gm29410-201ENSMUST00000188383 694 ntBASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hfm1D3Z4R1 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 n-R5s84-201ENSMUST00000122591 109 ntBASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Gm5298-201ENSMUST00000201122 892 ntBASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms