Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm20392-201ENSMUST00000173047 701 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm45113-201ENSMUST00000207518 165 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm19091-201ENSMUST00000208120 978 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm45120-201ENSMUST00000208880 408 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm17877-201ENSMUST00000192578 814 ntBASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm9645-201ENSMUST00000197131 792 ntBASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a6B1AVK5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Gm14219-201ENSMUST00000120414 288 ntBASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Gm25545-201ENSMUST00000122673 323 ntBASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms