Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc194A0A140LIT1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Matn2-203ENSMUST00000226766 3252 ntBASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Gm24644-201ENSMUST00000157114 139 ntBASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Gm4271-201ENSMUST00000174444 973 ntBASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc194A0A140LIT1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm12138-201ENSMUST00000122180 951 ntBASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm27331-201ENSMUST00000183705 60 ntBASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc194A0A140LIT1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms