Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm11918-201ENSMUST00000121660 179 ntBASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav6n-6A0A075B6B2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm27701-201ENSMUST00000184498 110 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm6745-201ENSMUST00000199216 526 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 BC043934-202ENSMUST00000185694 2356 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms