Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Gm3890-201ENSMUST00000182416 207 ntBASIC12.53□□□□□ -0.4
H2afb2S4R1M3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb2S4R1M3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.52□□□□□ -0.4
H2afb2S4R1M3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm11425-201ENSMUST00000119608 498 ntBASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm5781-201ENSMUST00000219792 443 ntBASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm45930-201ENSMUST00000221330 292 ntBASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Gm9396-201ENSMUST00000076703 567 ntBASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.52□□□□□ -0.41
H2afb2S4R1M3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2afb2S4R1M3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Mir1982-201ENSMUST00000157368 74 ntBASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Gm43433-201ENSMUST00000196573 481 ntBASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms