Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm23984-201ENSMUST00000157139 203 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm17208-201ENSMUST00000168388 535 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm9630-201ENSMUST00000178304 885 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Proscos-202ENSMUST00000178990 666 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm8598-201ENSMUST00000221184 836 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm26035-201ENSMUST00000083065 308 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb3S4R1G7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Gm6180-201ENSMUST00000065243 498 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Gm5356-201ENSMUST00000093326 615 ntBASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms