Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atp6ap1Q9R1Q9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atp6ap1Q9R1Q9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Mir1247-201ENSMUST00000116706 82 ntBASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Atp6ap1Q9R1Q9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm24231-201ENSMUST00000104315 133 ntBASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atp6ap1Q9R1Q9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atp6ap1Q9R1Q9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms